PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015069-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 1012aa MW: 115223 Da PI: 5.8222

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015069-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.8	2.2e-14	37	129	3	99
EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 k+ + +++ + +l +p k+++++ + ++ + ++l +g++W+v+l k +g+++l+kGW+ Fvk L+ g f++F++d+ + e++v++ AUR62015069-RA 37 KIIVAPSTQIH-NLKIPEKYVRTYyE-EQLANDYVKLSVNDGKVWRVEL--FKEGGKVWLSKGWECFVKNYSLNYGYFLLFRYDE-VKYEYRVTI 126 55555555555.5*********63.445566899999******..9999***********************987.88889** PP E-S CS B3 97 frk 99 f++ AUR62015069-RA 127 FDT 129 997 PP
2	B3	38.6	2e-12	216	300	12	99
HTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 k+ l++p f++++g++ s ++ l+ s + W+v++ +k + l+kGW++F + L+ g +vF+ldg + +++v +++k AUR62015069-RA 216 KQPKLRIPVGFVKKYGEQ--LSDDIFLNVpNSEKPWKVEI--KKENTDMSLGKGWQDFMEFYSLEYGHLLVFRLDGGLQSHFYVLILDK 300 556799*******966..8889994555****..88888899***********************99666689999887 PP
3	B3	39.9	7.7e-13	408	499	1	93
EEEE-..-HHHHTT-EE--.HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlp.kkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 f+++ p +v+++ +l++p +++a+++ ++ +s +++l+ ++g+s v + + kk l +GWk Fv +n+Lk+gD ++F+l++ +e ++ AUR62015069-RA 408 FKSIICPTHVHNKYILSVPfNSHASTYfPSD--KSEKIILKGPTGKSHAVGYYFGKKHA--QLISGWKYFVLDNDLKVGDACMFELVSLlDEDSY 498 5566778888889888888445566666444..6679*************4444443..3667******************9876555555 PP E CS B3 93 v 93 v AUR62015069-RA 499 V 499 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence
MEVLKKGNKS KGKKIALTTI PEITPENLHA LGPCFYKIIV APSTQIHNLK IPEKYVRTYY 60 EEQLANDYVK LSVNDGKVWR VELFKEGGKV WLSKGWECFV KNYSLNYGYF LLFRYDEVKY 120 EYRVTIFDTT CFEIEYDQEF DNHTKDQEVI KISPQEEEVD QDDNDDYGVT LADAKIVVVD 180 DENNTSVTES LEAFKSENPH FKVVMEYPKM NLLTKKQPKL RIPVGFVKKY GEQLSDDIFL 240 NVPNSEKPWK VEIKKENTDM SLGKGWQDFM EFYSLEYGHL LVFRLDGGLQ SHFYVLILDK 300 SGTEIDYPVR SSHVSNRSAD SRLLKRDVTE DHSHHTEETD DVSLETLDES SPKINTFDSV 360 INLDTSDSDD DVEGLSFKSK GNDEISPEMR KKNLKKKLDS LKSQYPHFKS IICPTHVHNK 420 YILSVPFNSH ASTYFPSDKS EKIILKGPTG KSHAVGYYFG KKHAQLISGW KYFVLDNDLK 480 VGDACMFELV SLLDEDSYVV AIEKIIERDF FPDIPKLRDR IDWLEAVNTR DPVQIRDAQL 540 KILERRRGLN PTDGGKIRTP GSTFFKNSVT PFDFDRTPSV IDGNFGGGEV VGDGNSVNVN 600 LSLDQFFRKY TSEDNDSFNR IMEKVNRKRK ERYGYLLEGE KEEDDEVKGI EDVKRDRITD 660 GYGTSDQPVS TLEGWKYCAK NLLMYHPADR GEAPLTADER AERLKGLTKE VDRYNTRFHG 720 KMSDSGLKEE DEVEVLYNMV AGGTPVISDR NRDKTKKYDL EDLRKSPNVF YVESEKKAEN 780 GYSFVKTPSP APGADESPFI TWGEIEGTPL RLDSEDTPLD IGGSGEGSRF KIPLPPTRDL 840 KAHSLSREAA RKLKERSRMY EKPPLPSPMR SGSASPNVRT LSPAAQKFMR NAMAKSSASV 900 DESLRASYRG NSPGPGTPKP GRSMSKLARD GTIDSARSPS VREGSNPPWS LYPDPFIRTE 960 LLLTIKSVLW TCGERDSNDV LLVTYYCWTV VEQKFSAVYI DHFAMFRLRG V*

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence

MEVLKKGNKS KGKKIALTTI PEITPENLHA LGPCFYKIIV APSTQIHNLK IPEKYVRTYY  60
EEQLANDYVK LSVNDGKVWR VELFKEGGKV WLSKGWECFV KNYSLNYGYF LLFRYDEVKY  120
EYRVTIFDTT CFEIEYDQEF DNHTKDQEVI KISPQEEEVD QDDNDDYGVT LADAKIVVVD  180
DENNTSVTES LEAFKSENPH FKVVMEYPKM NLLTKKQPKL RIPVGFVKKY GEQLSDDIFL  240
NVPNSEKPWK VEIKKENTDM SLGKGWQDFM EFYSLEYGHL LVFRLDGGLQ SHFYVLILDK  300
SGTEIDYPVR SSHVSNRSAD SRLLKRDVTE DHSHHTEETD DVSLETLDES SPKINTFDSV  360
INLDTSDSDD DVEGLSFKSK GNDEISPEMR KKNLKKKLDS LKSQYPHFKS IICPTHVHNK  420
YILSVPFNSH ASTYFPSDKS EKIILKGPTG KSHAVGYYFG KKHAQLISGW KYFVLDNDLK  480
VGDACMFELV SLLDEDSYVV AIEKIIERDF FPDIPKLRDR IDWLEAVNTR DPVQIRDAQL  540
KILERRRGLN PTDGGKIRTP GSTFFKNSVT PFDFDRTPSV IDGNFGGGEV VGDGNSVNVN  600
LSLDQFFRKY TSEDNDSFNR IMEKVNRKRK ERYGYLLEGE KEEDDEVKGI EDVKRDRITD  660
GYGTSDQPVS TLEGWKYCAK NLLMYHPADR GEAPLTADER AERLKGLTKE VDRYNTRFHG  720
KMSDSGLKEE DEVEVLYNMV AGGTPVISDR NRDKTKKYDL EDLRKSPNVF YVESEKKAEN  780
GYSFVKTPSP APGADESPFI TWGEIEGTPL RLDSEDTPLD IGGSGEGSRF KIPLPPTRDL  840
KAHSLSREAA RKLKERSRMY EKPPLPSPMR SGSASPNVRT LSPAAQKFMR NAMAKSSASV  900
DESLRASYRG NSPGPGTPKP GRSMSKLARD GTIDSARSPS VREGSNPPWS LYPDPFIRTE  960
LLLTIKSVLW TCGERDSNDV LLVTYYCWTV VEQKFSAVYI DHFAMFRLRG V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-16	B3 family protein