PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62015067-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 261aa MW: 30669.4 Da PI: 9.2646 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.4 | 8.3e-16 | 5 | 88 | 10 | 97 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 +++++ l++p +++++++++ + ++l+ +gr+W+v+l k +g+++ltkGW++ vk Lk g ++Fk+d++ s+f ++++f AUR62015067-RA 5 STQNHKLRIPETYVKKYEEQLVN-DYVKLRVADGRVWRVEL--FKERGEVWLTKGWEKVVKCYSLKYGNLLLFKYDESdSTF--HITIF 88 556788***********655444.48***************..9*******************************9744555..99887 PP | |||||||
2 | B3 | 56.9 | 3.9e-18 | 162 | 259 | 8 | 99 |
-HHHHT..T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-...TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 8 sdvlks..grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvlt...kGWkeFvkangLkegDfvvFkldgrsefelv 93 ++ ++ r+ +p +++++h g++ +k+++l ++ +s++v+l++ rk++++++l+ GW++Fv+ n+Lk gD +vF+l++r++ ++ AUR62015067-RA 162 RSYISNklYRMAIPMSYLRKHlkGMD---EKEIILLGPDEKSYNVRLNVykRKTPKKIMLAelrFGWRNFVHGNKLKLGDACVFELVDRRSNMYK 253 3333332589***********86444...468***************766888888888876668**********************999999** PP EEEE-S CS B3 94 vkvfrk 99 v+vfr+ AUR62015067-RA 254 VTVFRA 259 ****96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MVAPSTQNHK LRIPETYVKK YEEQLVNDYV KLRVADGRVW RVELFKERGE VWLTKGWEKV 60 VKCYSLKYGN LLLFKYDESD STFHITIFGM NGCEIEYDQV YHNYIKAQEI IEISSHDDEM 120 IAQDDQDTAI SPVVVAGDKT SVMERLEAFN SQNPHFKVIM RRSYISNKLY RMAIPMSYLR 180 KHLKGMDEKE IILLGPDEKS YNVRLNVYKR KTPKKIMLAE LRFGWRNFVH GNKLKLGDAC 240 VFELVDRRSN MYKVTVFRAD * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-18 | B3 family protein |