PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015064-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 403aa    MW: 46294.9 Da    PI: 5.5385
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015064-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.82e-13306393590
                     -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     +  ++v+++ rl++p ++++eh  +++++  +l+l+   + + ++++l++  k+  + v  +GW++Fv++n+L +gD ++F+l++  + 
  AUR62015064-RA 306 MHCNNVSNQYRLSFPINHVREHlTIVSKKL-KLILKRsVDEKCYNFRLNVyAKNNLAQVGFAGWRNFVQDNELLVGDACIFELVDPGTV 393
                     5556788999************85554444.555554388899*****55444444444557********************9864333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MVMTDGNGNR QQQPAVVNDS TWMHYTGTRR SSHYNLLSFI SNITLELASA RNPLSKATDH  60
EKSYPVRLNL YNKNSQAAVG LGWKNFVLNN DLHAGDGCVF ELVCPQTHAY KYDESDSKHN  120
VTIFGMNSCE IEYDQVYHNY IKAQEIIEIS SHDDEMIGHQ DDNDTAISPE EFVPGGDKTS  180
AMERLEAFKS QNPRFKVIMR PSYVSNLYRM SYSLKFGDFL LFRYDEANFE FCVTIFDMSG  240
YEIDYDQVFQ NRIDLAQQVL ENSTCDDDDD DITHEAKEIH TIDETTSVMH SIEAFKSQKP  300
HFKLVMHCNN VSNQYRLSFP INHVREHLTI VSKKLKLILK RSVDEKCYNF RLNVYAKNNL  360
AQVGFAGWRN FVQDNELLVG DACIFELVDP GTVIFKVTTI RK*