PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014912-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 269aa    MW: 30664.3 Da    PI: 6.1747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014912-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-19124175256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd ++   +  r++lg+f taeeAa a+++a+++++g+
  AUR62014912-RA 124 HYRGVRRRP-WGKYAAEIRDSTK---KgGRVWLGTFNTAEEAALAYDKAALRIRGA 175
                     7********.**********443...238************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MNIKKEEHKP PEAAILESIW ANYIGVTNSQ EAWNNTPRIF QDWIGIPSLE EENDGPSNAL  60
KRLPSLGRWV SMGSETWEEL LDKIVGSSTK NPRETCYVED KKSETSNNSK ENMEKTNKTI  120
PVRHYRGVRR RPWGKYAAEI RDSTKKGGRV WLGTFNTAEE AALAYDKAAL RIRGAGKASL  180
NFPLEAVTKA VVGSQYDKNN SHCNNPWKRE ARDWELRQSD YVDELMIQQP SFKRSRFSMD  240
NLLDSQHDVL ELEDLGNDIL EYLLSSTL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.12e-31ERF family protein