PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62014879-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 253aa MW: 28592.2 Da PI: 8.4603 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 105.9 | 4.9e-33 | 11 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79 lp+G++F+Ptd e++ e+L++kv+++ l+ e+i+++d i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ AUR62014879-RA 11 LPAGVKFDPTDTEIL-EHLEAKVKSDLgrlhplLD--EFIPTIDgengICYSHPEKLP-GVSKDGVMRHFFHCPSKAYTTGTRKRRKVHtdedgg 101 799***********9.99*****998877754322..23555544445**********.555556678******************744456655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk++++l +g+++g kk+Lv+y gr++k+ekt+Wvmh+y++ AUR62014879-RA 102 ETRWHKTGKTRPILI-NGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHI 151 778************.999***********66589**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
GAGGINDLPG LPAGVKFDPT DTEILEHLEA KVKSDLGRLH PLLDEFIPTI DGENGICYSH 60 PEKLPGVSKD GVMRHFFHCP SKAYTTGTRK RRKVHTDEDG GETRWHKTGK TRPILINGAV 120 KGFKKILVLY TNYGRQRKPE KTNWVMHQYH IGQNEEERDG EFVLSKVFYQ TQPRQCGSTI 180 KEVPQDVEHP ALIKAPLNYY HPSYIPYDHH HQQQQHNDVG EQSRDRPSQL IPNLILQGDG 240 SSLFTIATTR KS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-107 | NAC family protein |