PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014472-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 451aa MW: 50851.9 Da PI: 6.0223

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014472-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.8	5.1e-10	380	417	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt++qV++WF N R + AUR62014472-RA 380 FEHflHPYPNDSEKLTLASQTGLTKNQVSNWFINARVR 417 664459******************************88 PP
2	BELL	89.3	4e-29	240	310	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +++lq+ +kL++lle+V+ rY y + ++ +issFe++ag g+ak Yt+lA +a+SrhF +L+dai+ qi AUR62014472-RA 240 KHDLQINFSKLITLLEQVEVRYDEYFQRMEDLISSFEMIAGDGAAKCYTALAFQAMSRHFCSLRDAIVTQI 310 6899*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MVSQETQTNP TSSSSLHHFL ISNPISSQPL FDKYDQNPHF DDSYNSDIIR VNSSNPFSDH 60 QSLGNTHFPT IQSLEERMSR SINLVHDHSS VVVHPDDHSD MGHTRHLMDL LGASNEANQG 120 PNRLSLSLGS QVLHSPQYRQ RTFTSELMQQ AYSNLVSSSG DQENCNPGDY SFMGNSSFTT 180 YSVSNSMYLK PAQSILEEVI DLGSKDIELN NVKRLFMCSR GLCSELRAEL MSNGFLSADK 240 HDLQINFSKL ITLLEQVEVR YDEYFQRMED LISSFEMIAG DGAAKCYTAL AFQAMSRHFC 300 SLRDAIVTQI KIIRKKISPD LPKIGSGLSH LSLLDRDGRN SNSRMSLQQI GLIQGTHRQA 360 WRPIRGLPET SVAILRAWLF EHFLHPYPND SEKLTLASQT GLTKNQVSNW FINARVRLWK 420 PMIEEMYKEE FGDSSVDSSG EGQIDKTEDQ *

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MVSQETQTNP TSSSSLHHFL ISNPISSQPL FDKYDQNPHF DDSYNSDIIR VNSSNPFSDH  60
QSLGNTHFPT IQSLEERMSR SINLVHDHSS VVVHPDDHSD MGHTRHLMDL LGASNEANQG  120
PNRLSLSLGS QVLHSPQYRQ RTFTSELMQQ AYSNLVSSSG DQENCNPGDY SFMGNSSFTT  180
YSVSNSMYLK PAQSILEEVI DLGSKDIELN NVKRLFMCSR GLCSELRAEL MSNGFLSADK  240
HDLQINFSKL ITLLEQVEVR YDEYFQRMED LISSFEMIAG DGAAKCYTAL AFQAMSRHFC  300
SLRDAIVTQI KIIRKKISPD LPKIGSGLSH LSLLDRDGRN SNSRMSLQQI GLIQGTHRQA  360
WRPIRGLPET SVAILRAWLF EHFLHPYPND SEKLTLASQT GLTKNQVSNW FINARVRLWK  420
PMIEEMYKEE FGDSSVDSSG EGQIDKTEDQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-103	TALE family protein