PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014471-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 663aa MW: 73472.9 Da PI: 6.515

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014471-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	441	478	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + AUR62014471-RA 441 FEHflHPYPKDSEKIMLARQTGLTRSQVANWFINARVR 478 664559******************************88 PP
2	BELL	121.9	2.6e-39	308	379	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+k kL s+l+eVd+rYkqy++q+q ++ssF++vag+g+akpYt+lAlk+iSrhFrcL+dai++qi AUR62014471-RA 308 ERQELQNKLDKLHSMLDEVDRRYKQYCQQMQLLVSSFDVVAGVGAAKPYTALALKTISRHFRCLRDAITNQI 379 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MATYYPSSSA QLDVLSAPYV RDQKFASYSE SPLLHGNMMM YLTSSSPGSF SEISPGSSMN 60 PQNGVEMPAM NGRNEMMFIP PTGDSMCMQP MSGTLNSGGG ENVGNSMPGE LQLTSRSQIN 120 MVDGEQNLQG LSLSLSTQMS TAVSTSQFQQ YQYSNPGLSS VLSPHLPFSA ENNVRPMACK 180 VDEASPNKDM RNSDFFPYEL QGDGHNNIRF GALNNPQYSM NAKAMNCNQY QYEQAGMANT 240 LVKSKYLKAA QQLLDEVVNV REALKRSDSG KEQNTSKVDE SSKESKGGSQ AASEANESGS 300 TVELSPAERQ ELQNKLDKLH SMLDEVDRRY KQYCQQMQLL VSSFDVVAGV GAAKPYTALA 360 LKTISRHFRC LRDAITNQIQ ATRKSLGEQD NGLGVIPRLR YVDQQLRQQR ALQQFGMMRH 420 AWRPQRGLPE SAVTILRAWL FEHFLHPYPK DSEKIMLARQ TGLTRSQVAN WFINARVRLW 480 KPMVEEMYKE EFGEAELLNS KSSPENTPKL AREKSWGSED RREEMQESST SIVHDAHDSK 540 INVNQGIGAN NDNHGFYSNN GILSSPDPNG GGHGHPHLMA NPAAYQMSEL GNFNVDNQVS 600 LALGLRHREG DVTFRGNTNT DATMGVSTSD YNPYLEQVNQ QHRYCSICNI NYSSNAVKAV 660 SA*

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MATYYPSSSA QLDVLSAPYV RDQKFASYSE SPLLHGNMMM YLTSSSPGSF SEISPGSSMN  60
PQNGVEMPAM NGRNEMMFIP PTGDSMCMQP MSGTLNSGGG ENVGNSMPGE LQLTSRSQIN  120
MVDGEQNLQG LSLSLSTQMS TAVSTSQFQQ YQYSNPGLSS VLSPHLPFSA ENNVRPMACK  180
VDEASPNKDM RNSDFFPYEL QGDGHNNIRF GALNNPQYSM NAKAMNCNQY QYEQAGMANT  240
LVKSKYLKAA QQLLDEVVNV REALKRSDSG KEQNTSKVDE SSKESKGGSQ AASEANESGS  300
TVELSPAERQ ELQNKLDKLH SMLDEVDRRY KQYCQQMQLL VSSFDVVAGV GAAKPYTALA  360
LKTISRHFRC LRDAITNQIQ ATRKSLGEQD NGLGVIPRLR YVDQQLRQQR ALQQFGMMRH  420
AWRPQRGLPE SAVTILRAWL FEHFLHPYPK DSEKIMLARQ TGLTRSQVAN WFINARVRLW  480
KPMVEEMYKE EFGEAELLNS KSSPENTPKL AREKSWGSED RREEMQESST SIVHDAHDSK  540
INVNQGIGAN NDNHGFYSNN GILSSPDPNG GGHGHPHLMA NPAAYQMSEL GNFNVDNQVS  600
LALGLRHREG DVTFRGNTNT DATMGVSTSD YNPYLEQVNQ QHRYCSICNI NYSSNAVKAV  660
SA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19700.2	1e-112	TALE family protein