PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62014452-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 26854 Da PI: 6.3532 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 41 | 90 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +rf+lg+f t eAa a++aa++kl+g AUR62014452-RA 41 TYKGVRQRT-WGKWVAEIREP---N-RgARFWLGTFNTSHEAALAYDAAARKLYG 90 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MLKSKLGLGE KKQGKKHQVC QASSRKGCMR GKGGPENALC TYKGVRQRTW GKWVAEIREP 60 NRGARFWLGT FNTSHEAALA YDAAARKLYG TDAKLNLPEV FPHQLPNLAQ THVQARVQAR 120 GQVRIPCYQN GYNLCCLSEN SSLSGASDLS FPIEETNSTS TITDSTTTSV ESFGENEVGV 180 NHGLWENSNP SLPELDDSLW AETAMTLGFP PRVIDPQPEL SISDEPGLLS GNLYDDSFQF 240 LWSS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 6e-40 | ERF family protein |