PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014084-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 294aa MW: 33579.4 Da PI: 5.0361

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014084-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	4.1e-09	236	270	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL++rq+ +WF N+R ++ AUR62014084-RA 236 KWPYPTEADKIALAEMTGLDQRQINNWFINQRKRH 270 569*****************************885 PP
2	ELK	33.8	7.4e-12	190	211	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+qLlrK++++++sLk EFs AUR62014084-RA 190 DLKDQLLRKFGSHISSLKLEFS 211 6********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MMDEIYGLHP TAADYSDKAL MSPENLILPS DYHSFVMNSG SAAAVRFGSD ELISATCISE 60 SASEMHQRGD DTSSSIKAKI ASHPHYPRLL LSYIDCHKET YCEILDKYKS DLSRPFDEAT 120 NFLNKIETQL RNLCKGAFVK TASAGDSETI RESSQEQGSL EEEGPVSSDE DYSAGEVDVQ 180 DLQPKDEERD LKDQLLRKFG SHISSLKLEF SKKKKKGKLP REARQMLFEW WNAHYKWPYP 240 TEADKIALAE MTGLDQRQIN NWFINQRKRH WKPSENMQYA LMENYSGQYF TDD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-97	TALE family protein