PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62013935-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

STAT

Protein Properties

Length: 667aa MW: 74867 Da PI: 6.2774

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62013935-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	152.6	1e-47	207	327	2	122
STAT 2 dvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkyp 96 +vvll+a+g+ v+kd+evvasL+yad+ +++eks+d eapLL++++G+ef+s d+p+kllrGrasf+l +++Lss+cdn+Lf++kf+++kl k+p AUR62013935-RA 207 NVVLLDAFGELVDKDLEVVASLIYADNRAPIEKSKDGEAPLLTTCNGLEFPSDDKPSKLLRGRASFQLNLTRLSSECDNKLFCVKFHLLKLGKFP 301 69******************************************************************************************* PP STAT 97 fleavskpirCisrsrntrsssltkk 122 f+ea++ pir i +s +t+ s+ t+k AUR62013935-RA 302 FFEAFTPPIRSILKSCDTKVSTITWK 327 *****************9999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
SHSEIPFLSL SEDKRLILSP SLLLRKEYSE SGETASSTEV AISNVELPLG QWVHIGCQFN 60 AVAYTISSYL LILLLDYKEL LELSCVKCFD NVRQLLQVYS SIIRIYLQGK VVGERPLDSL 120 MARQADLQSF KKVTLSGVRK GFKDLDGYVY NAVVLPSTNS IEDHHAKDPP LCLCIDSSSV 180 SDVELEGDGI WKIFGGKGSC RKMFSSNVVL LDAFGELVDK DLEVVASLIY ADNRAPIEKS 240 KDGEAPLLTT CNGLEFPSDD KPSKLLRGRA SFQLNLTRLS SECDNKLFCV KFHLLKLGKF 300 PFFEAFTPPI RSILKSCDTK VSTITWKKLS SGFHLFNRSS LPQNGIGHSE LHQKPVCEAI 360 PNPPLKRKKS GQDTPLPHTK AESTVQRFDE EGNSFNVSAT KNVVGTSLES IQENYGEIDS 420 SASDSDSAGA GNTESKSFTC NIDLTSDLTI FRYCLGGLSE RSIMLKESSL YASEQEIVEM 480 AEKVSFFSGC DHHRHQIMIA KKLLEEGERA WNLISQNSHR VQWDNVVFEI EEQFMRISSC 540 STRSLTQQDL NFLRRISGGS EYLTKDDFDK LWRWLYPVAF TISRHGINAL WASISPKWIE 600 GFVTKEEVEY ALQSPQGLQE PGTFILRFPT TRSWPHPDAG SLVASYVGRD FSLHHRQLSL 660 DYRYFW*

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

SHSEIPFLSL SEDKRLILSP SLLLRKEYSE SGETASSTEV AISNVELPLG QWVHIGCQFN  60
AVAYTISSYL LILLLDYKEL LELSCVKCFD NVRQLLQVYS SIIRIYLQGK VVGERPLDSL  120
MARQADLQSF KKVTLSGVRK GFKDLDGYVY NAVVLPSTNS IEDHHAKDPP LCLCIDSSSV  180
SDVELEGDGI WKIFGGKGSC RKMFSSNVVL LDAFGELVDK DLEVVASLIY ADNRAPIEKS  240
KDGEAPLLTT CNGLEFPSDD KPSKLLRGRA SFQLNLTRLS SECDNKLFCV KFHLLKLGKF  300
PFFEAFTPPI RSILKSCDTK VSTITWKKLS SGFHLFNRSS LPQNGIGHSE LHQKPVCEAI  360
PNPPLKRKKS GQDTPLPHTK AESTVQRFDE EGNSFNVSAT KNVVGTSLES IQENYGEIDS  420
SASDSDSAGA GNTESKSFTC NIDLTSDLTI FRYCLGGLSE RSIMLKESSL YASEQEIVEM  480
AEKVSFFSGC DHHRHQIMIA KKLLEEGERA WNLISQNSHR VQWDNVVFEI EEQFMRISSC  540
STRSLTQQDL NFLRRISGGS EYLTKDDFDK LWRWLYPVAF TISRHGINAL WASISPKWIE  600
GFVTKEEVEY ALQSPQGLQE PGTFILRFPT TRSWPHPDAG SLVASYVGRD FSLHHRQLSL  660
DYRYFW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-158	STAT family protein