 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | AUR62013727-RA | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 188aa MW: 21165.9 Da PI: 9.0584 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 53.6 | 3.7e-17 | 21 | 75 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++ keq+ +Le++F ++ +++++++ LA++++L rqV vWFqNrRa+ k
AUR62013727-RA 21 RKKLRLCKEQVLVLEQAFSEHTTLNTKQKVALATQVNLRPRQVEVWFQNRRARTK 75
66777889*********************************************98 PP
| |||||||
| 2 | HD-ZIP_I/II | 114.6 | 5.8e-37 | 21 | 110 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl keqv +LE+ F+e+++L++++Kv+la++++l+prqv+vWFqnrRARtk kq+E d+e+Lk+ +++l+een+rL+kev+eLr +l
AUR62013727-RA 21 RKKLRLCKEQVLVLEQAFSEHTTLNTKQKVALATQVNLRPRQVEVWFQNRRARTKFKQTELDCEQLKKYCETLTEENKRLQKEVHELR-AL 110
69*************************************************************************************9.44 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 188 aa Download sequence |
MISDDEEGGN RGGGESSGVE RKKLRLCKEQ VLVLEQAFSE HTTLNTKQKV ALATQVNLRP 60 RQVEVWFQNR RARTKFKQTE LDCEQLKKYC ETLTEENKRL QKEVHELRAL KFSPENSTMD 120 ANHPPTTLTM CPSCKNVSFS SSSATTRTPA VETGRSLMGV FHQHTPLSIQ KLSFTINNNQ 180 VIESSKP* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 70 | 78 | RRARTKFKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G44910.1 | 6e-53 | HD-ZIP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|