PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012917-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 912aa MW: 101286 Da PI: 6.7252

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012917-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.9	9.6e-29	586	636	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k+isl++l++yF++++kdAA+++gvc+T+LKriCRq+GI+RWP+Rkik++ AUR62012917-RA 586 QKTISLDVLRQYFAGSLKDAARSIGVCPTTLKRICRQHGIARWPSRKIKKV 636 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MDDGSFNPTN NPPVFGNIDY DLMEQLLDDG CCPSTSRGLS YPSSFSFPSL EPVSSSLTSP 60 GNQLSSYREK WSPKEEQAVD SENQDDSAIT PAAAVLNQSR SFSWEGNELN RILWIGPKAN 120 SGASTSVRER LMRAVTSLRD LNRNRDVLIQ IWVPIKKGLK SFLTTVEQPY FHQPSSTRLL 180 HYRDVSEKYE FLADEDTKQA HGLPGRVFLG KVPEWTPDVR YFRTEEYPRQ VYARQFDVRG 240 SIALPVFEKG SGDSLGVVEI IMTTDKFDYR PEIESVCKAL ETVHLRSSEI LDTPPEQSGK 300 RTYDAVEPEI LTVVRAVCDS LDLPLAQTWA PCSQQGKGGC WHSENNVNCV SIIDSACYVR 360 DQRVMDFHKA CSDHHLLRSQ GGIVGKAFDT NQPCYATDIT EFSKVEYPLS HHARMIGLRG 420 AVAVRLRSIY HEKNDYVLEF YLPSNVQEKG LAFHSRIWQS VSVVIQQHCR YLNFITDNDF 480 EQKLLFPGKP AADSETKETS WFSQMMEPQR KGKEVVVSLE FGEDEPSKGF KVMNWSDNEP 540 SLQLGQALSD SENINQDSGS KGISGTSSGG RLPLSARSEK RRTKTQKTIS LDVLRQYFAG 600 SLKDAARSIG VCPTTLKRIC RQHGIARWPS RKIKKVDHSL RKLQLVIDSV QGAEGSIQLS 660 SFYSKFPELN SPTTQPKQSQ VSSINLNNQP KQQPTTQPEG TIHPTGGTNS NSPASTSSSQ 720 TSTSSYCFSS GAKMSSPVTT IASGSKDAST TEDPSSSLKR ARSEAELQVL ISSKKEASQI 780 LERSQSNKTL AEHPSFETLP PLPITKSWLS REAGVFKAKA TFGDEKVRFS ILPNMGFLDL 840 QQEIVKRFNL EDLSKMGIKY LDDDKEWVLL TCDADLEECI DIHKSSGSHT IKLSICPLSS 900 LASSFGSSGL S*

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MDDGSFNPTN NPPVFGNIDY DLMEQLLDDG CCPSTSRGLS YPSSFSFPSL EPVSSSLTSP  60
GNQLSSYREK WSPKEEQAVD SENQDDSAIT PAAAVLNQSR SFSWEGNELN RILWIGPKAN  120
SGASTSVRER LMRAVTSLRD LNRNRDVLIQ IWVPIKKGLK SFLTTVEQPY FHQPSSTRLL  180
HYRDVSEKYE FLADEDTKQA HGLPGRVFLG KVPEWTPDVR YFRTEEYPRQ VYARQFDVRG  240
SIALPVFEKG SGDSLGVVEI IMTTDKFDYR PEIESVCKAL ETVHLRSSEI LDTPPEQSGK  300
RTYDAVEPEI LTVVRAVCDS LDLPLAQTWA PCSQQGKGGC WHSENNVNCV SIIDSACYVR  360
DQRVMDFHKA CSDHHLLRSQ GGIVGKAFDT NQPCYATDIT EFSKVEYPLS HHARMIGLRG  420
AVAVRLRSIY HEKNDYVLEF YLPSNVQEKG LAFHSRIWQS VSVVIQQHCR YLNFITDNDF  480
EQKLLFPGKP AADSETKETS WFSQMMEPQR KGKEVVVSLE FGEDEPSKGF KVMNWSDNEP  540
SLQLGQALSD SENINQDSGS KGISGTSSGG RLPLSARSEK RRTKTQKTIS LDVLRQYFAG  600
SLKDAARSIG VCPTTLKRIC RQHGIARWPS RKIKKVDHSL RKLQLVIDSV QGAEGSIQLS  660
SFYSKFPELN SPTTQPKQSQ VSSINLNNQP KQQPTTQPEG TIHPTGGTNS NSPASTSSSQ  720
TSTSSYCFSS GAKMSSPVTT IASGSKDAST TEDPSSSLKR ARSEAELQVL ISSKKEASQI  780
LERSQSNKTL AEHPSFETLP PLPITKSWLS REAGVFKAKA TFGDEKVRFS ILPNMGFLDL  840
QQEIVKRFNL EDLSKMGIKY LDDDKEWVLL TCDADLEECI DIHKSSGSHT IKLSICPLSS  900
LASSFGSSGL S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein