PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012830-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 528aa MW: 59842.8 Da PI: 6.7818

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012830-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40	9.4e-13	105	147	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W ++E+ ll+++ +++G g+W+ +a+++g ++ +qc++++++ AUR62012830-RA 105 DWNADEEILLLEGLEMYGLGNWAEVAEHVG-TKNKEQCINHYRS 147 6***************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MGRSRVFHSD EDPTQRSRRK KNVSSGESIE SALGGQGTGD GKKALYHCNY CNKDITGRIR 60 IKCAMCPDFD LCIECFSVGV EMTPHKSNHP YRVMDSLSFP LISPDWNADE EILLLEGLEM 120 YGLGNWAEVA EHVGTKNKEQ CINHYRSVYL NSPFFPLPDM SHVVGKNRND LLAMAKENDE 180 DRKGSTLFGD HVVKTEPTFS PSRVKVDELP KGGPPSRLLS VQNADSHVNP IGKKPPKEED 240 SSLVSLSGFS LKRHEFDPEY DIDAEQLLAD MEFKDADTED ERELKLRVLR IYSKKLDERN 300 RRKDFILERN LLYPLRKICL LKRRQYVADM IHSCGSILRK STKICYRLSS QNTVLTSEFW 360 NLRTSSLEIV STFWFTLDLK CNNDLEARAV GCRTSAEADK YFELKRKREA EESSRRAKES 420 AQLGPASQFG QNAAMTSETV KDPGSLIHEL DIGRYPGEEL LSEAEKQLCH ETKISPHQYL 480 KMQETISVKI FSGNVTSNVD AHCLFDIEPG KIDRIYDMLI RKGVAPS*

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MGRSRVFHSD EDPTQRSRRK KNVSSGESIE SALGGQGTGD GKKALYHCNY CNKDITGRIR  60
IKCAMCPDFD LCIECFSVGV EMTPHKSNHP YRVMDSLSFP LISPDWNADE EILLLEGLEM  120
YGLGNWAEVA EHVGTKNKEQ CINHYRSVYL NSPFFPLPDM SHVVGKNRND LLAMAKENDE  180
DRKGSTLFGD HVVKTEPTFS PSRVKVDELP KGGPPSRLLS VQNADSHVNP IGKKPPKEED  240
SSLVSLSGFS LKRHEFDPEY DIDAEQLLAD MEFKDADTED ERELKLRVLR IYSKKLDERN  300
RRKDFILERN LLYPLRKICL LKRRQYVADM IHSCGSILRK STKICYRLSS QNTVLTSEFW  360
NLRTSSLEIV STFWFTLDLK CNNDLEARAV GCRTSAEADK YFELKRKREA EESSRRAKES  420
AQLGPASQFG QNAAMTSETV KDPGSLIHEL DIGRYPGEEL LSEAEKQLCH ETKISPHQYL  480
KMQETISVKI FSGNVTSNVD AHCLFDIEPG KIDRIYDMLI RKGVAPS*