PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012757-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 161aa MW: 18871.2 Da PI: 7.906

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012757-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.7	5.5e-10	84	118	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ AUR62012757-RA 84 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 118 569*****************************985 PP
2	ELK	41.5	2.8e-14	38	59	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsL+qEF+ AUR62012757-RA 38 ELKGQLLRKYSGYLGSLRQEFL 59 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MQNVFMAAYG EIPDRNGSSE EDIDVNNNFI DPSEEDRELK GQLLRKYSGY LGSLRQEFLK 60 KRKKGKLPKE ARQQLLDWWS RHYKWPYPSE SQKLALAEST GLDQKQINNW FINQRKRHWK 120 PSEDMQFVVM DAAAHSHAHS HYGYMDNVLG NPFPMDVSPT L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	54	63	LRQEFLKKRK
2	60	64	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	3e-76	TALE family protein