PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012739-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 463aa MW: 49500.8 Da PI: 6.5098

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012739-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98	6e-31	193	251	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ AUR62012739-RA 193 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 251 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MNLHRRSSED DHDEEYDDQN NKKKVVEETC SRDHHQSATA TATPALPDSA PLLDNNNVNA 60 IMQGKAEEKP MVPRQFLDLV SGANTETDER TSQTLSDDER TVDRSGSPLN SMEVASRANN 120 KELNLANYDN GKRIREESPE GSDAQGWGHN KVPKLMNNVV KPTSPPVDQA AAEATMRKAR 180 VSVRARSEAP MISDGCQWRK YGQKMAKGNP CPRAYYRCTM AVGCPVRKQV QRCAEDRSIL 240 ITTYEGNHNH PLPPAAMAMA STTSAAASML LSGSMPSGDG FMNPNFLART ILPCSSSMAT 300 ISASAPFPTV TLDLTHSPNP LQMRQSVPQT NGPFQVPFQP QTSQVGPNFL GSIPQIFGQA 360 LLNSNNNNNQ SKFSGLQTTS PQGLDASHLQ HPNQNPAFAD TLNAATAAIA NDPNFTAALA 420 AAISSIIGGA RAPAENNNAA GDATTSGNNA NNVTTSSSMQ QQ*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MNLHRRSSED DHDEEYDDQN NKKKVVEETC SRDHHQSATA TATPALPDSA PLLDNNNVNA  60
IMQGKAEEKP MVPRQFLDLV SGANTETDER TSQTLSDDER TVDRSGSPLN SMEVASRANN  120
KELNLANYDN GKRIREESPE GSDAQGWGHN KVPKLMNNVV KPTSPPVDQA AAEATMRKAR  180
VSVRARSEAP MISDGCQWRK YGQKMAKGNP CPRAYYRCTM AVGCPVRKQV QRCAEDRSIL  240
ITTYEGNHNH PLPPAAMAMA STTSAAASML LSGSMPSGDG FMNPNFLART ILPCSSSMAT  300
ISASAPFPTV TLDLTHSPNP LQMRQSVPQT NGPFQVPFQP QTSQVGPNFL GSIPQIFGQA  360
LLNSNNNNNQ SKFSGLQTTS PQGLDASHLQ HPNQNPAFAD TLNAATAAIA NDPNFTAALA  420
AAISSIIGGA RAPAENNNAA GDATTSGNNA NNVTTSSSMQ QQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-91	WRKY family protein