PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012698-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 270aa    MW: 30451.1 Da    PI: 5.0756
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012698-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-1275119347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       W+ +E+ l++ +v+ +G g+W++I+r + ++R++ q+ s+ qk+
   AUR62012698-RA  75 QWSDDEHRLFIIGVEIYGQGDWRSISRSVVLTRSPTQVASHAQKF 119
                      6******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDQDSRYQEI SHLLGLSRTA AEVKLQYDQL VYDLERIEGG QVDYFLQHWH EKENSCRIIP  60
SPPKKKIKDS SKASQWSDDE HRLFIIGVEI YGQGDWRSIS RSVVLTRSPT QVASHAQKFF  120
DKKKYPKVTK RSSIHNITTV NVDEANDLYR KRKLSSEMLD AYLQKLASGP DQQEAHTSEP  180
LEILASGCVQ QEAYVPEPLN TLASGCVQQE AYVPEPLKTL AYDCYQQETH TLESLEMLAE  240
HALLDPLEVL ASSWVQQEAC TSAPGAAEP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.14e-27MYB family protein