PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012691-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 249aa    MW: 28239.5 Da    PI: 6.1729
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012691-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-1265109347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       W+ +E+ l++ +v+ +G+g+W++I+r + ++R+  q+ s+ qk+
   AUR62012691-RA  65 QWSDDEHRLFIIGVEIYGKGDWRSISRSVVLTRSSTQVASHAQKF 109
                      5******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDGNSRFQQI SNLLGQSRTA QEVKLQYDRL VYDLGRIDGG QVDYFPRHWY EEENKKMKNS  60
SKGAQWSDDE HRLFIIGVEI YGKGDWRSIS RSVVLTRSST QVASHAQKFY NKKKCPKVTK  120
RSSIHNITTV NVDEANDLFR KGKLLPEMLD AYLQKLGFGP DQQEAHTSEP LETLASGRVQ  180
QEAYVPEPLT TLASGCVHQQ ETHTPESPEV YESLEMLVSL DPLEVLASSW VQQEAYTSAE  240
PSTKRTRE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-27MYB family protein