PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012660-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 729aa    MW: 79835.5 Da    PI: 5.8888
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012660-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.8e-1955110156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++l+L+  qVk+WFqN+R+++k
  AUR62012660-RA  55 KKRYHRHTQHQIQEMENFFKECPHPDDKQRKELSRRLSLEPLQVKFWFQNKRTQMK 110
                     688999***********************************************998 PP
2START216.21.1e-672484681206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+++a+a++p+W  s+    e++n++e+ ++f+++ +      ++ea+r+s+vv+m++++lve+l+d++ qW+  +     +a+tl
  AUR62012660-RA 248 ELAVAAMEELIRMAQAGDPLWIPSAdnstEILNEEEYFRNFPRGIGpmplgLKSEASRDSAVVIMNHMNLVEILMDVN-QWSCVFSgivsRAMTL 341
                     57899**************************************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q++splvp R+ +fvRy++q+g+ +w++vdvS+d  ++ p    + R++++pSg+li++++ng+skv wvehv
  AUR62012660-RA 342 EVLSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHGDSTWAVVDVSLDGLRPSP----IPRCRRRPSGCLIQELPNGYSKVMWVEHV 432
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+++r lv+sgla+gak+wv++l+rqce+
  AUR62012660-RA 433 EVDDRAVHNIYRALVNSGLAFGAKRWVSALDRQCER 468
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MFETHHQLLD MSGHKTPDSE LGKMRDDEFE SSRSATENLE GLSGDDQDPN QRPKKKRYHR  60
HTQHQIQEME NFFKECPHPD DKQRKELSRR LSLEPLQVKF WFQNKRTQMK AQHERSENQQ  120
LRNENEKLRA DNIRFKEALS NATCPNCGGP AAIGEMSFDE QQLRIENARL REEIDRISGI  180
AAKYVGKPLV TYPHLQNQGL QPSRSSLDLG VGSYGPQSGM VGDIYGSAGD LIRSVAPPTE  240
ADKPMIIELA VAAMEELIRM AQAGDPLWIP SADNSTEILN EEEYFRNFPR GIGPMPLGLK  300
SEASRDSAVV IMNHMNLVEI LMDVNQWSCV FSGIVSRAMT LEVLSTGVAG NYNGALQVMT  360
AEFQVPSPLV PTRENYFVRY CKQHGDSTWA VVDVSLDGLR PSPIPRCRRR PSGCLIQELP  420
NGYSKVMWVE HVEVDDRAVH NIYRALVNSG LAFGAKRWVS ALDRQCERLA SVMASNMPAG  480
EGGVITSPEG RKSMLKLAER MVMSFCAGVG ASTAHTWTTL SGSGADDVRV MTRKSMDDPG  540
RPPGIVLSAA TSFWMPVSPK RVFDFLRDEN SRSEWDILSN GGLVQEMAHI ANGRDPGNCV  600
SLLRVNSANS SQSNMLILQE SSTDPTGSYV IYAPVDIVAM NVVLNGGDPD YVALLPSGFA  660
ILPDGPVGAH GGGPLEVGSG GSLLTVAFQI LVDSVPTAKL SLGSVATVNS LIKCTVERIK  720
AAVACENP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein