PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62012461-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ARR-B | ||||||||
Protein Properties | Length: 521aa MW: 57205.8 Da PI: 6.835 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 47.8 | 3.1e-15 | 159 | 191 | 23 | 55 |
G2-like 23 GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 G+ +A+Pk+ilelm+v+ Lt+e+v+SHLQkYRl AUR62012461-RA 159 GTGEAVPKKILELMNVDKLTRENVASHLQKYRL 191 7789****************************8 PP | |||||||
2 | Response_reg | 81.1 | 3.6e-27 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+++l+k +y +v++++++ +al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+++++ + + G AUR62012461-RA 20 VLAVDDDPICLRLLESLLRKCQY-HVTTTSQAIQALKMLRENKnmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDPKLVMKGITHG 112 799********************.***************999999*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ eel + AUR62012461-RA 113 ACDYLLKPVRLEELKN 128 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 521 aa Download sequence |
MTVEQREDES IDQFPVGMRV LAVDDDPICL RLLESLLRKC QYHVTTTSQA IQALKMLREN 60 KNMFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP 120 VRLEELKNIW QHVVRRKKFD PKDRNSSNSL DKNSGGDNGT GEAVPKKILE LMNVDKLTRE 180 NVASHLQKYR LYLKRISAVA NQQANMAAAL GGPDYLRMNA VNFHGFNASP QFHNNSLRPI 240 PPPGVLGRLN TPAGMGGLHG LPPSGLVQLS QPQNPTSSIT DSKLYPNLFA GDHTGNVLQG 300 MPTSLEFDQL HKNNTILSGS SNSILSLPNS LLTMQGRSSQ ETQSLDSFGV NMNSAPNLLD 360 HNRCSSSWPA AVQSQPNSMN PMDNRVHDFS PNISIQSRLQ NSNMMGENMM QNTSHVAKQV 420 WDVDFLDGSA NPSVTGTHSV YNPSSRSRDT GYDMMGQPGF DCLAPHPQHD QMLQNSAVDM 480 TRKTKQGQFM EQGGRPLGNY NAGNGAGSLE DVVTAMFKPV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-104 | ARR-B family protein |