PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012445-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HB-other
Protein Properties Length: 334aa    MW: 36698.2 Da    PI: 6.2523
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012445-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.97.1e-082412742154
                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     k +yp++e++++L +++gL+ +q+ +WF N+R +
  AUR62012445-RA 241 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 274
                     469*****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MSAIPTQPGE LTHNEETGKP EIGDGEVSVG AGNSGGGGGD RGEQVNWQNA KFKAEILGHP  60
LYEQLLAAHV ACLRIATPVD QIPRIGAQLD QSQNVVAKYS ALGSEQLQQH VRVHAMEAVM  120
ACWEIEQSLQ SLTGVSPGEG TGATMSDDED DPIESDSNLF DGGLDGADTM GFGPLIPTES  180
ERSLMERVRQ ELKHELKQAS HIGYKDKIVD IREEILRKRR AGKLPGDTTS VLKAWWQSHS  240
KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHSNP SSSSALKSKR KSIERGIVFC  300
DMRGSGETLL MKVAKNPSIS RGAYEQKMNG PVY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.21e-137TALE family protein