PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012280-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 346aa MW: 38482.3 Da PI: 10.2344

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012280-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.1e-32	38	91	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ AUR62012280-RA 38 PRLRWTPDLHLCFVHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 91 8****************************************************7 PP
2	Myb_DNA-binding	51.5	2.4e-16	39	90	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ AUR62012280-RA 39 RLRWTPDLHLCFVHAVERLGGQeraTPKLVLQLMNiKGLSIAHVKSHLQMYR 90 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MVIKINGSSS STSTVEENEK KGPTSSGSVR PYNRSKMPRL RWTPDLHLCF VHAVERLGGQ 60 ERATPKLVLQ LMNIKGLSIA HVKSHLQMYR SKKIDESNQE ALSNQGLFAD GRDNIYNLSQ 120 LPMLQGYNHQ RSPFSLRYGD PSWRGHSTSQ MYAPYNIGTS SDRSRNGLNF GSLPERMVFS 180 STNSNSHQAG IKNLFQGQIS NWRTQQTLKK APIFQSNNGS SSCQSTSKPR SNMELNLAIS 240 PTQEVAVERK ERSNPLNFLK PSNINIKQGT TPNNNHLKRK AMDLDLSLAL ATKDIDDPLT 300 KKNTKDKEVI GSDELLSLSL QYPPPLSSTS EHDQLISKLK EGDAN*

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MVIKINGSSS STSTVEENEK KGPTSSGSVR PYNRSKMPRL RWTPDLHLCF VHAVERLGGQ  60
ERATPKLVLQ LMNIKGLSIA HVKSHLQMYR SKKIDESNQE ALSNQGLFAD GRDNIYNLSQ  120
LPMLQGYNHQ RSPFSLRYGD PSWRGHSTSQ MYAPYNIGTS SDRSRNGLNF GSLPERMVFS  180
STNSNSHQAG IKNLFQGQIS NWRTQQTLKK APIFQSNNGS SSCQSTSKPR SNMELNLAIS  240
PTQEVAVERK ERSNPLNFLK PSNINIKQGT TPNNNHLKRK AMDLDLSLAL ATKDIDDPLT  300
KKNTKDKEVI GSDELLSLSL QYPPPLSSTS EHDQLISKLK EGDAN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-51	G2-like family protein