PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62012213-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | WOX | ||||||||
Protein Properties | Length: 195aa MW: 22247 Da PI: 8.3653 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.1 | 1e-20 | 34 | 95 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ AUR62012213-RA 34 KCGRWNPTAEQVKVLTDLFRSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 95 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.2 | 6.5e-37 | 34 | 97 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ AUR62012213-RA 34 KCGRWNPTAEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 97 678***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MEEGMSGFCI QTTKTTRAAS YGSGGGGPPS SGTKCGRWNP TAEQVKVLTD LFRSGLRTPS 60 TDQIQKISTQ LSFYGKIESK NVFYWFQNHK ARERQKRRRV SKDHDAPCFQ LDDHLKPIAP 120 AKYFGEINQI VCEPERAIET LQLFPLNSYH EQESDKLRMF SNECCKENYA TFAAYTFGRD 180 HFDHPPLDLR LSFF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 100 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 6e-58 | WOX family protein |