PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012204-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 252aa    MW: 28427.1 Da    PI: 9.1516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012204-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94.1e-071131491147
                      HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +++ + +++G+g+W+ I+r +   +t+ q+ s+ qky
   AUR62012204-RA 113 RFLLGLQKHGKGDWRNISRNFVISKTPTQVASHAQKY 149
                      899999****************789***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MGAIYPASLF TNSSYDNWLF PGDSKSTIWT KEENKRFEKA LVIFDENTPD RFSRIADMIP  60
GKSAWDVMKQ YKELLEDVTD IEAGLVPIPG YLASPFTLEW VDNAKFDPFR KRRFLLGLQK  120
HGKGDWRNIS RNFVISKTPT QVASHAQKYF LRQSSGGKDK RRPSIHDITT ANLSDNAMPS  180
VSETDEKPKS LLEHSSGSFP LLQKSFNVMP KMLLDWSNTN GEAFMVFDSP HGRQNLYSSA  240
YQGASAYIGS H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-67MYB family protein