PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012180-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 372aa    MW: 40886 Da    PI: 5.3896
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012180-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.81.4e-144382647
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +eEd+ ++ a++ +G++ W+ Ia+ ++ gRt++ +k++w++ 
   AUR62012180-RA 43 EEEDQTIISAHAIHGNK-WACIAKLLP-GRTDNAIKNHWNST 82
                     7****************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MYDPCGLSCH GLNMHLESEE LLYKDNVLGK AVCFQLPLPD QAEEEDQTII SAHAIHGNKW  60
ACIAKLLPGR TDNAIKNHWN STLRRRYDFG KSVGDSSFDR NKASSEETVS GETNSFKAYD  120
GKHDVNMVVN QCPHPDYQSP VNENLNQSMQ PENQPSIMYE NPPIVVAYPP MIAYPPFYAH  180
YAEPIEHPKP SRPVARVGAF NVYQPSSNLT PAAPPPKPVP VQGPLVNAFQ PDFGISKFLD  240
GVQCEPIIPL RCGHGCCSTP TGAKTQSSLL GPEFIEYEEP PSFSSHELAS IATDLNNIAW  300
IKSGLDSGCT RRMEDPTQRR DTQGTDNSGQ CAQTNNVRFE EGRTKLMGMM TEVLSTKIPR  360
QTVALPAEVG V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.12e-51MYB family protein