PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012153-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 449aa MW: 50650.7 Da PI: 8.5751

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012153-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.6	1.3e-10	275	313	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 lFe ++yps +++ LA+k+gL+ +qV++WF N R + AUR62012153-RA 275 LFEHflHPYPSDSDKHMLAQKTGLSRSQVSNWFTNARVR 313 5665569******************************98 PP
2	BELL	83.2	3.2e-27	158	219	11	72
BELL 11 kLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 L+s+l+eV+krYk y++q+q +ssFe vaglg+a+p+ +A +a+ rhF+cLk+ai +qi AUR62012153-RA 158 NLVSMLHEVYKRYKLYCQQMQSAVSSFESVAGLGNAAPFLCFAVRAMLRHFQCLKNAILDQI 219 69**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDDDPYHVPQ QSRRHKLRYH PHNHNHNHRN NDIDIDIIVP QHHHQHPFLS PLQVLHPTSS 60 SADHHPPTMA AASTNLSLSS SSAHARAYLP SPVGPFTGYA SILGRSRFLR PAQELLEEFS 120 RASGVSFQKQ GPYKILEDSG TLFNDTDDDL SLRCSNPNLV SMLHEVYKRY KLYCQQMQSA 180 VSSFESVAGL GNAAPFLCFA VRAMLRHFQC LKNAILDQIR VTSKAFSSSV DTRSDRTPGS 240 CSEDKGPSPN FLQHPVWRSQ RGFPDKAVAV LRNWLFEHFL HPYPSDSDKH MLAQKTGLSR 300 SQVSNWFTNA RVRLWKPMVE EMHALERKTQ CSKAEDMPKF FSLVTDQQNS LHSQLSEKDF 360 QIAYSHRDQD SSHCKRSKIE AFPRAEQGKE QFSMLCNRLP NNQVLDVGGS HSGAHVSHSS 420 AIGSNQDNTT GLSWSNHGQI VPFWLAKQ*

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDDDPYHVPQ QSRRHKLRYH PHNHNHNHRN NDIDIDIIVP QHHHQHPFLS PLQVLHPTSS  60
SADHHPPTMA AASTNLSLSS SSAHARAYLP SPVGPFTGYA SILGRSRFLR PAQELLEEFS  120
RASGVSFQKQ GPYKILEDSG TLFNDTDDDL SLRCSNPNLV SMLHEVYKRY KLYCQQMQSA  180
VSSFESVAGL GNAAPFLCFA VRAMLRHFQC LKNAILDQIR VTSKAFSSSV DTRSDRTPGS  240
CSEDKGPSPN FLQHPVWRSQ RGFPDKAVAV LRNWLFEHFL HPYPSDSDKH MLAQKTGLSR  300
SQVSNWFTNA RVRLWKPMVE EMHALERKTQ CSKAEDMPKF FSLVTDQQNS LHSQLSEKDF  360
QIAYSHRDQD SSHCKRSKIE AFPRAEQGKE QFSMLCNRLP NNQVLDVGGS HSGAHVSHSS  420
AIGSNQDNTT GLSWSNHGQI VPFWLAKQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	4e-68	TALE family protein