PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62012073-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 220aa MW: 24060.7 Da PI: 9.4927 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.3 | 1.3e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G g W+tI + R+ ++k++w++ AUR62012073-RA 5 KQKWTAEEEAALKAGVLKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55 79***********************************88***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MGAPKQKWTA EEEAALKAGV LKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMT 60 TGFGSREKSK VALKRVPMHS SPVKQEENTT SVSDVPQSDE EMPDVKNVAT SSAPVEISPA 120 PKRSIVRLDN LILEAITNLK ESGGSNKTAI GSYIEINPLT QCFAEERQAT PFVAVVIKAL 180 MGILREDSAG LRCLEVRLVE WLKEGNGGTP WLAKRLIFG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 5e-66 | MYB_related family protein |