PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62012048-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | G2-like | ||||||||
Protein Properties | Length: 466aa MW: 52127.3 Da PI: 6.9917 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.4 | 1.2e-31 | 250 | 304 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+Fve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+ AUR62012048-RA 250 KTRIRWTTELHEKFVECVSRLGGADKATPKAILKLMNSDGLTIFHVKSHLQKYRI 304 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 254 | 303 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWTte++e++v++v +lGg t+k+I + m+ g+t ++ks++qky+ AUR62012048-RA 254 RWTTELHEKFVECVSRLGGAdkaTPKAILKLMNsDGLTIFHVKSHLQKYR 303 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MSNQKIDFRE QVQQTNGVIN DCMMEIGSRD SQFISVRQPW NMGSCMGGGG VESQPQHILP 60 ANLSSTVISR FGSPVPDFST AERYGSLPYA HQISSPTFSS QCSKNYDLEY RSFPCSTEGF 120 SAQLAEQDAN ELQSRTTLET AAKSLLYGDQ SQFYASGKTY ASPCGNFQES EHIQQLKNKL 180 LVDYANSDGR NYIFRINEKQ DFRILDKSYE SPHGHFSFSS QGEKQVLRPL GVLPLNSGNS 240 FSSGAAISSK TRIRWTTELH EKFVECVSRL GGADKATPKA ILKLMNSDGL TIFHVKSHLQ 300 KYRIAKYMPD STEGKSGRSG SSLNDVTQID IKDGVQLKEA LSLQLDVQRR LHEQLEIQRN 360 LQLRIEEQGR QLKMMFDQQQ KTRQSLLGDQ NSDNTSPNGP TFSLDDVQVS SEEGLRAMLI 420 AAKGRSYDLQ IEWIQMLWRW KSRGRATYDQ SGDDGILCTV LLSVA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 2e-70 | G2-like family protein |