PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011973-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 385aa MW: 43572.7 Da PI: 5.7244

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011973-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.3e-36	46	138	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+yei++d+++++++sw++ g+sfvv+d++ fa+ +Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F kg+k++l++ AUR62011973-RA 46 FLTKTYEIVDDPSTDNIVSWNRGGQSFVVWDPHAFASGLLPRNFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLKGQKHQLKN 131 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ AUR62011973-RA 132 IRRRKHS 138 **976 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MNPLYPVKKE FPESSSTTLT FSGEISRNFP APQPREGLHE VGPPPFLTKT YEIVDDPSTD 60 NIVSWNRGGQ SFVVWDPHAF ASGLLPRNFK HNNFSSFVRQ LNTYGFRKID PDRWEFANEG 120 FLKGQKHQLK NIRRRKHSSN PMFSQQGVID PCVELGRFGV DGEVDRLRRD KQVLMMELVK 180 LRQQQQNTRS FLQAMEQRLQ ATEIKQQQMM SFLARAMQNP AFLQQLVQQK EKRKELEEAL 240 SKKRRRPIDQ GQKGHLHSGE SSRYASVTSG SSVPLGMGHV KAEPLDFGGS YGYDQYDPLG 300 PVSELEALAL EMQGYSRGGT ELGEEERGGL DQFEGDDKEL DEEFWEELLN ERVKAAASSD 360 QGGEEQEDVN VLADRLGYLG SSPK*

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MNPLYPVKKE FPESSSTTLT FSGEISRNFP APQPREGLHE VGPPPFLTKT YEIVDDPSTD  60
NIVSWNRGGQ SFVVWDPHAF ASGLLPRNFK HNNFSSFVRQ LNTYGFRKID PDRWEFANEG  120
FLKGQKHQLK NIRRRKHSSN PMFSQQGVID PCVELGRFGV DGEVDRLRRD KQVLMMELVK  180
LRQQQQNTRS FLQAMEQRLQ ATEIKQQQMM SFLARAMQNP AFLQQLVQQK EKRKELEEAL  240
SKKRRRPIDQ GQKGHLHSGE SSRYASVTSG SSVPLGMGHV KAEPLDFGGS YGYDQYDPLG  300
PVSELEALAL EMQGYSRGGT ELGEEERGGL DQFEGDDKEL DEEFWEELLN ERVKAAASSD  360
QGGEEQEDVN VLADRLGYLG SSPK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	246	KRKELEEALSKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-127	HSF family protein