PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011878-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 288aa    MW: 30813 Da    PI: 4.9907
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011878-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.8e-19119169255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd + ng   r++lg+f+ ae Aa a+++a+ +++g
  AUR62011878-RA 119 SYRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDNAEAAALAYDQAAFAMRG 169
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDNSFYYSSF SSHQTQNYYY HHHHPQSTPS ESESSGSVGS SESFPWNEFW STYNSVTLPQ  60
LPFNINDSDE IALFNMLSEQ GTQQGNRAET NPASPASTNS ATSSFSQADV GPMEVEKKSY  120
RGVRRRPWGK YAAEIRDSTR NGVRVWLGTF DNAEAAALAY DQAAFAMRGP MAVLNFPVEI  180
VRESLKEMKR ENGEFDEDNQ ACSTSPVIAL KRKHLLNRKS MGNNNPAVAG IPALEEAVGF  240
NGCGVYPAPV GIAAGEAGAV CSAAGAPACE GCGVAVGTVL GADCSKV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-35ERF family protein