PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011826-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 595aa    MW: 67778.1 Da    PI: 5.8798
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011826-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12e-1026114398
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     k ++++   +   l++pkkfa++  ++   s  ++l+ ++g++ +v+l     ++  ++++GW++Fv+   +    f++F+++g+s+f  +v vf
  AUR62011826-RA  26 KLMLSPPQQSI-KLRIPKKFARTRRNE--LSSPVILTVPTGETRKVEL--VEEDNDLWFRDGWEDFVEYCSIGLAYFMLFEYEGNSNF--KVNVF 113
                     55555555555.5********888644..5567***************..99999*****************************9999..88887 PP

                     - CS
              B3  98 r 98 
                     +
  AUR62011826-RA 114 D 114
                     6 PP
2B353.15.6e-17220311192
                     EEEE-..-HHHHT.T-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlks.grlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     ff + ++++vl + + l +pk f + h   ++   ++k ++le  +gr+W+v +   + + +y++++GW +F+++ gL++gD++vF+l++ ++  
  AUR62011826-RA 220 FFVAAIKEYVLGNgKYLNIPKAFGQGHlrcEIY--QKKSVKLEAYDGRQWNVDC--VRDKTKYIFSRGWINFARQIGLEVGDICVFELTDAKKHV 310
                     66667788888885679**********987444..5567***************..999999*************************98766654 PP

                     . CS
              B3  92 l 92 
                     l
  AUR62011826-RA 311 L 311
                     4 PP
3B341.52.5e-13496586898
                     -HHHHTT.-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   8 sdvlksg.rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      +vl +g  l +p +f+ +h + +  +sk ++l    g++ +vk+   ++++r+++++GW  F++  gL++gD++vF+l++  +  l+v++ +
  AUR62011826-RA 496 TYVLHKGlYLNVPVSFCHDHlKCNVMQSKFIKLVAYGGKQVTVKC--IRSQSRCTFGSGWIIFARGAGLEVGDVCVFELTDAINYVLHVHIAK 586
                     555555413689********9666678999***************..999999*************************988766667777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    
MKIMKPKKIE GQELKTKRRH PTHFYKLMLS PPQQSIKLRI PKKFARTRRN ELSSPVILTV  60
PTGETRKVEL VEEDNDLWFR DGWEDFVEYC SIGLAYFMLF EYEGNSNFKV NVFDLTGFEI  120
SYPFNARSYS RMQHEGVDYS DGNDSMKHEI MHTSSFNSSK ASDVEVIGLS SEDDECVGDD  180
EVMDETRECF PFGYPFWLKR FQGLINVVIA AGIPLPKNPF FVAAIKEYVL GNGKYLNIPK  240
AFGQGHLRCE IYQKKSVKLE AYDGRQWNVD CVRDKTKYIF SRGWINFARQ IGLEVGDICV  300
FELTDAKKHV LRVHGIPEKF ARAFREELSA VAILTVPTGE TQKVALVEEG NNLWFHDGWQ  360
DFVEYYSIGY ASFLLFKYDG NSNFRVHIFD PSACEISYQC SARIAFKPQL DPCPEEIDDD  420
AEDSREILHL SSVDVNNSDS EEIINLNSDD ETNDAREYSP FGYFCNLENK EGIMNTVAAA  480
GIPLPDRPYF VTDIKTYVLH KGLYLNVPVS FCHDHLKCNV MQSKFIKLVA YGGKQVTVKC  540
IRSQSRCTFG SGWIIFARGA GLEVGDVCVF ELTDAINYVL HVHIAKKSQI KAAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-32B3 family protein