PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62011773-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 187aa MW: 20779 Da PI: 10.0231 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.7 | 3.2e-11 | 11 | 63 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 + hn+ E+ RR ++N+ f Lr+llP + ++kK s i +A +Y+ +Lq AUR62011773-RA 11 KLDHNAKEKVRRMKLNETFLALRSLLPDsR---RAKKrWSGPYIIDRALDYVPQLQ 63 678*************************66...77777****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
GGVREGSSSK KLDHNAKEKV RRMKLNETFL ALRSLLPDSR RAKKRWSGPY IIDRALDYVP 60 QLQAEIEKLT LEKSNMLSVL GKKQQLVVGS SDVRDANKDK KTLTVSMNEV KSGEVIVQIC 120 EQNNKVGILS TLIEKLEGQG IHVLGASSQR ACENRSCFHL HVQMGESPVE ADYVAVLHKK 180 IISWLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71200.1 | 7e-29 | bHLH family protein |