PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011404-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 275aa MW: 31236.5 Da PI: 7.3082

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011404-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.9	8.9e-14	12	95	2	91
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f ++ ++d+++++ l++p f+e+ ++k + +++l+d W v++ + +++++++GW+ v++ L+ g+f+vFk+dg+s f AUR62011404-RA 12 FRTF-HPDHNSEN-LRIPDAFLEHLSKK--IPEKVVLRDCYDDCWPVEI--VETEDGMFFQGGWSMLVSSYPLRGGEFMVFKYDGHSAFD 95 5555.45555555.******666544..7779***********..9999999************************998884 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGSSEDNHPE FFRTFHPDHN SENLRIPDAF LEHLSKKIPE KVVLRDCYDD CWPVEIVETE 60 DGMFFQGGWS MLVSSYPLRG GEFMVFKYDG HSAFDIKIPN SHKSKKQKVA SSVSQEEAKL 120 PTGEEDEEEV VMDQPMNSAK GGIFGRGSNR SVTGSHVMNL EKRITDLFPS DNPFFVTKFK 180 TINGRKDVTI PQAIRKGYGL KFGNRIKIQD PKGRLHDGKI AIWKDGRHAI TNFWKQLCMF 240 NNVMKDDNVI CELIPSTTNT CRLIKVQIIH PNTD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	6e-20	B3 family protein