PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62011313-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 83aa MW: 9204.23 Da PI: 7.6861 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.3 | 9.4e-10 | 14 | 61 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 +WT+ + +a + + ++ +W+ Iar +g g+t++++k ++ ++l AUR62011313-RA 14 SWTAKQNNAFERALAVYDKEtpdRWHNIARAVG-GKTAEEVKRHYEDLL 61 7*****************99*************.***********8875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MATGSMSSRG MGSSWTAKQN NAFERALAVY DKETPDRWHN IARAVGGKTA EEVKRHYEDL 60 LEDIKNIESG QVPFPNYKNM GN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 3e-35 | MYB_related family protein |