PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011071-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 483aa MW: 53902 Da PI: 5.5465

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011071-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.4	1.3e-13	151	228	1	84
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k +++s+v+ +l lpkkf+++h ++ ++l de g++ + k+ + + l++GW++F ++gL egD+++ + AUR62011071-RA 151 FVKLMLKSHVSGGFWLGLPKKFCDKHLP--VCDSNVVLVDEAGKKSSTKY--LAAK--VGLSGGWRGFSIDHGLLEGDVLIYVV 228 89**********************64..47778***********..5555..55*****************98764 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MLQDGHQTEI QPILPLQNQE QSESTKPSKD MDTSDHTLFE DNVNVMSKSS KIRTKIESHK 60 RARDISDDDE SSKNRELVVW VPQQKKERAK KKRVKTNDLS HDKNAKASEI SITQKFRRSD 120 LSDPLPSGDK SSSLKRAEEI QANLPDEYPS FVKLMLKSHV SGGFWLGLPK KFCDKHLPVC 180 DSNVVLVDEA GKKSSTKYLA AKVGLSGGWR GFSIDHGLLE GDVLIYVVRG QTFGEVDGSI 240 GLLTLDPGVG QQISEGNSQK VLQTEEDNNT SSGYLSQSNS DIESGPEVLE GIQFSDSDIK 300 FEGVEAFEDF HIVIDDLIMD SKFSTNTLKK YYELCHSQSS FLHENFLKGL NCNLVVGIIA 360 ETINIADAIK SCKKASTSHE DLRVWEKTLK GFEMLGMKVD FLVTHINQLL GIAVESDTAD 420 ESNKLKESII KRALAEERMK LLENKLTQLK DSMQKINFEM DAEIKMSSAL KQEARIKEII 480 AI*

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MLQDGHQTEI QPILPLQNQE QSESTKPSKD MDTSDHTLFE DNVNVMSKSS KIRTKIESHK  60
RARDISDDDE SSKNRELVVW VPQQKKERAK KKRVKTNDLS HDKNAKASEI SITQKFRRSD  120
LSDPLPSGDK SSSLKRAEEI QANLPDEYPS FVKLMLKSHV SGGFWLGLPK KFCDKHLPVC  180
DSNVVLVDEA GKKSSTKYLA AKVGLSGGWR GFSIDHGLLE GDVLIYVVRG QTFGEVDGSI  240
GLLTLDPGVG QQISEGNSQK VLQTEEDNNT SSGYLSQSNS DIESGPEVLE GIQFSDSDIK  300
FEGVEAFEDF HIVIDDLIMD SKFSTNTLKK YYELCHSQSS FLHENFLKGL NCNLVVGIIA  360
ETINIADAIK SCKKASTSHE DLRVWEKTLK GFEMLGMKVD FLVTHINQLL GIAVESDTAD  420
ESNKLKESII KRALAEERMK LLENKLTQLK DSMQKINFEM DAEIKMSSAL KQEARIKEII  480
AI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	95	KKERAKKKRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-33	B3 family protein