PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010799-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 349aa    MW: 39032.8 Da    PI: 6.2944
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010799-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19117167155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  AUR62010799-RA 117 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 167
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MESSPKILQP VKFTEHKNQT TLHKKPRNKS SEKFHHHHSV FPKIVRISVT DGDATDSSSD  60
EEYSDDSRRR RVKRESEEAA VAVRTNGVVS RRPKKRGKSS SSVKHTNTLN VNVNGGKKFR  120
GVRQRPWGKW AAEIRDPLRR VRLWLGTYDT AEEAAMVYDN AAIQLRGPHA LTNFSTPNSD  180
KETQXXXXXX XXXXKKLSLS TTSSSIDDDD DGSHHRPSVY SPTSVLRFQP EPVSPKEEEV  240
VVVVKEEEQQ NVELLGNPCS SPYVSCVDSL FPSGFFDFEN TVPSVPDLFE QTALGCDGGQ  300
VFGEDCKYGM FLDCADDRHD YFGLSGWSTN DYFPDIGDIF GSDPLVAL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16875RRRRVKRE
29399PKKRGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.15e-43ERF family protein