PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62010657-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19048.5 Da PI: 4.5055 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.8e-16 | 16 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+ +++ g+Wv+eIr+p++ ++r++lg++ tae+Aa+a++aa+++l+g AUR62010657-RA 16 LYRGI--RPRGGKWVSEIREPRK---TTRIWLGTWPTAEMAAAAYDAAALALKG 64 69***..699**********843...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MSTTLPVVSP TGKHPLYRGI RPRGGKWVSE IREPRKTTRI WLGTWPTAEM AAAAYDAAAL 60 ALKGSEAVLN FPEDVLRYPV PNSNSPADIR NAAAVAAATK QEREKKIGDE VEKVGKEGAE 120 EEFIDMEALF NMPNLLVDMA GAMMVSPPRL SATGDRDLVE DDCDVGESGS LWNYD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-35 | ERF family protein |