PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010631-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 266aa MW: 29137 Da PI: 5.8108

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010631-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104	1.2e-32	6	90	9	102
HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102 +++d+++++lisw+++g+sf+v+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv ++ weF+++ Fk+g+k ll++i+r+k AUR62010631-RA 6 LVDDPAVDDLISWNDDGSSFIVWRPAEFARDLLPNYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKALLRDIQRRKI 90 799******************************************************99.........*******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MLPMPLVDDP AVDDLISWND DGSSFIVWRP AEFARDLLPN YFKHNNFSSF VRQLNTYGFR 60 KVVPDRWEFA NDCFKRGEKA LLRDIQRRKI SPAPAINSPT TAVASPTTVP AAVTVAAPPP 120 VAIRTVSPAN SGDEQVHSSN SSPAPGTATV QRIASCTTTT EILEENERLR RENLTLSQEL 180 NHLRGLCNNI LAMMSNYATG QTEPGGLPEE RQLDLLPAKP AAADCSGFPL ERSASVETMM 240 KRVAKESGLL LFIRSKSSKV QEDEI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	7e-60	HSF family protein