PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010402-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 330aa    MW: 36372.8 Da    PI: 6.059
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010402-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.1e-20248281134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++tkTp+WR gp+g+ktLCnaCG+++++ +
  AUR62010402-RA 248 CSHCQVTKTPQWRAGPNGPKTLCNACGVRFKSGR 281
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MECMEARALK SSFSSEIAMK TNNPQSIFDD FWCVAGLPSD DFSIDEFFDL PNEENIDGSS  60
VLEEEDEKDS SSFSLSSSHD PVDDSNDNST NFSPDLAIPV DDVQELELWS HLMDDSIPEP  120
ILACPNPILD AQKTKTGFNF MNRVEPVNKP VFYRISCIPN PSAVPVKPRS KRSRSTGNRS  180
WVFNSPPKTD SSSTSSPTSS PVSTLFFPPP VQDMGVLFNF GKPPMKKPKK KPAVNSSAGE  240
NPPVQRRCSH CQVTKTPQWR AGPNGPKTLC NACGVRFKSG RLFPEYRPAC SPTFSSEVHS  300
NSHRKVLEMR KKKETTESIT GLAQTILSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-48GATA family protein