PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010080-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 353aa MW: 40279 Da PI: 5.2818

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010080-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.9	3.3e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL +k++g+k++l e+i+e+d+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v+ AUR62010080-RA 6 LPPGFRFHPTDEELVAYYLDRKITGRKIDL-EIIPEIDLYKCEPWDLPdKsFLPGKDLEWYFFSPRDRKYPNGSRTNRATRAGYWKATGKDRPVH 99 79**************************.99**********96434445667*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+ykgrap+g +t+Wvmheyrl AUR62010080-RA 100 S-QKTAVGMKKTLVYYKGRAPHGLRTNWVMHEYRL 133 .9999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLDRKITG RKIDLEIIPE IDLYKCEPWD LPDKSFLPGK 60 DLEWYFFSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS QKTAVGMKKT LVYYKGRAPH 120 GLRTNWVMHE YRLLESLSGS TPSLKESYAL CRVFKKTIQN NPRTKEVGDV FIPDNECIDE 180 DVQGDDHTRG IEITRRIREA NQNQDHLSRH NNNDGFNKFP SEASSELTNQ EGTPTGSALS 240 TDQDVQAPLF AADEANSSAH FYPFAFDYSS NLYQDMQMAN NYFNLPPLAI DDFPQMNISE 300 TTMSLKPIDH HQEMSNLGCD KFKDYMKGAI MFEDIFDLCS TQGTSINLPL ED*

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLDRKITG RKIDLEIIPE IDLYKCEPWD LPDKSFLPGK  60
DLEWYFFSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS QKTAVGMKKT LVYYKGRAPH  120
GLRTNWVMHE YRLLESLSGS TPSLKESYAL CRVFKKTIQN NPRTKEVGDV FIPDNECIDE  180
DVQGDDHTRG IEITRRIREA NQNQDHLSRH NNNDGFNKFP SEASSELTNQ EGTPTGSALS  240
TDQDVQAPLF AADEANSSAH FYPFAFDYSS NLYQDMQMAN NYFNLPPLAI DDFPQMNISE  300
TTMSLKPIDH HQEMSNLGCD KFKDYMKGAI MFEDIFDLCS TQGTSINLPL ED*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	3e-93	NAC family protein