PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010034-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 354aa    MW: 39976.6 Da    PI: 4.9145
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010034-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.1e-07324347629
                     HHHHHHHHHHHHHHHHHHHCTSCC CS
             HLH   6 nerErrRRdriNsafeeLrellPk 29 
                      ++Er+RR+++N+++  Lr+l+P+
  AUR62010034-RA 324 LMAERKRRKKLNERLYHLRSLVPN 347
                     589********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MSIASSPMDS LRQLVNSKTW DYCVLWKLSE DQRFLEFMDC CCAGSEGSME NGNTVGEELL  60
FPCRDMTFQH PRTRSCELLA QLPSSHPWDG INMEILISNQ PKWLNFSNVS DINVNEVSTG  120
TKLLIPIPGG LAELFAAKQI NEDQYVIDYV MTQCTTLMDQ AAISSSSNAG PSFTMDINMI  180
NELQSNPTLS DQNNAMSINN ESQSSMNFLQ QFNYVSDTNK MSRTDFLDEA NDSFQAENHH  240
QLNSFKSLSE NGFEDLMNNA NSMHNMHVLD HSANDHQHVD EKGPPPKHEM GRADSVSDSD  300
PLDDDDDPKY HRRKLTKGPQ SKNLMAERKR RKKLNERLYH LRSLVPNISK VKA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1312333RRKLTKGPQSKNLMAERKRRKK
2327334ERKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.11e-60bHLH family protein