PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62009950-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 386aa MW: 42577.9 Da PI: 4.4931 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 116 | 166 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++ge AUR62009950-RA 116 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRGE 166 69*******.**********954...4**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MCGGAVISDF IPAGRSHRLN SDYLWPELKK GVSGYSKPLR SETVNVVDED DDAVADQAFE 60 ADFLEFKDES DDDISIIPHF KPFSFGLFKP KSSNGLKPVE FNSQAEKTAK RKRKNQYRGI 120 RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDAEA RRIRGEKAKV NFPEETPVSA 180 AAPRRTVKAR AQKPAAKTAS PAPMQNMNQS FNIMNNAQNE YYNNFALVEE KPQVNQFEYS 240 NPMPALGELA VNPFNSLSGG TDLFFNSDEG SNSFDCSDFN WGENGPKTPE ISSFFSAALE 300 SDDSGNATKK LKSTSGDAVP FEENSGKSLS EELSDADLES QLNFLETPYL DENWAIDAFL 360 GGDASNGGAN PMELWSFDDF PGGVF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14230.1 | 2e-68 | ERF family protein |