PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009807-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 257aa    MW: 28355.7 Da    PI: 7.1957
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009807-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-1571120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +   g+Wv+eIr+p   +k+ r++lg++ tae Aa+a++  + +l+g
  AUR62009807-RA  71 IYHGVRVRD-GGKWVCEIREP---NKKSRIWLGTYPTAELAARAHDVGAIALRG 120
                     69******9.9*********9...347*******************99999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MNSTPFSSQL QYSPPLPSGG EYEDATSSDS PTNWSSASPF SNQLILNDEA VGFPKKRKAG  60
RRKFKETRHP IYHGVRVRDG GKWVCEIREP NKKSRIWLGT YPTAELAARA HDVGAIALRG  120
DKAVLNFPDS AWLAPRAKST SAKDIRLAAF QATRSELRSS SPSGCGKKIE LEVDSPTSRS  180
SVNHYFGTEG DIGEGDSKES LFIDEEAIFN YPSLINGMAA GMLLTPPCLK RGINWDTIHD  240
YGDNSYIDYM DLWHHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-51ERF family protein