PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009734-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 857aa    MW: 94015.8 Da    PI: 7.9857
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009734-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3598.3e-19325425199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+k+l+ sd+++ grlvlpk +ae++   +++ e+  l+++d +g++W++++++  +++s++yvl+ G     ++ +L++gD+v+F++++  +++
  AUR62009734-RA 325 FEKILSASDASRIGRLVLPKACAEAYfpTINQSEGLPLKIQDIKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGK 417
                     99**************************666667778***************9989999999***9.********************987.8999 PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                     lv++ +++
  AUR62009734-RA 418 LVIGYRKA 425
                     99988765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 857 aa     Download sequence    
MGSRICMNTS CGANSTVQWK KGWELKSGEI ADLCFNCGSS YEKSVYCDTF HPEETGWREC  60
SLCNKRLHCG CSASASLIEI QDFGGIWCIS CAESACCPPI RKDKFSGEAQ SSEKYSNAND  120
LQNNKPETNA ISNGNLFSLG NIIDTNIPRF LPQSPPALTN GPFGQIKPEA KNSSIGVAGL  180
GFSKFSHSLT GPTLCAPPNE DKANTGAKDV QESQMPSLNI SLRSPSETSN FGLTFSGGVE  240
EGDNSRSSLF QSGQRPRQIL PKPPKNNLAK VSDANKSSFS PMRVARPPAE GRLRNQLLPR  300
YWPRITDQEL QKLSGDLKTT IVPLFEKILS ASDASRIGRL VLPKACAEAY FPTINQSEGL  360
PLKIQDIKGN EWTFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RIDPGGKLVI  420
GYRKASNTLE VQDTQTSSAN PNGVAPGESC YPDVADSLSA RNDRSGLQSM GGAKDNQPNV  480
LPEQSNLVSG NTSWGKSEKL KSKVKEDVLE QPKPSDKKKN AKHWFQKQEE PPVFGKKTLF  540
ATRRSGAQEQ WAQCDNCSKW RKLPTETYLP SRWTCSENFW DSTRALCTSP EETYPKELDN  600
LIKGSKESRK RKAAESPEQR CEPSGLDALA TAATLGDNDE PSAGATTRHP RHRPGCTCIV  660
CIQPPSGKGK HKPSCVCNVC LTVKRRFKTL MMRKKKRQCE REAEMAQQKS NELQVTGPQL  720
PKKAAANDVM LNKDNLENEV SQEKSQERMQ LDEGENSSKG HIDLNCHPIR EEDSTADAQP  780
SAGIMALAQA ASAPDMYIEP NGLANLLGKQ PMDTDSCLLL KTCDYVDKCL STKEEHHLSV  840
AKEQEQCKAD GVGSSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1684695KRRFKTLMMRKK
2684697KRRFKTLMMRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.10.0B3 family protein