PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009681-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 174aa    MW: 19129.8 Da    PI: 6.4909
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009681-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260143.28e-4581071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+CakdC++apyfp ++p++fa vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la
  AUR62009681-RA   8 PCASCKLLRRRCAKDCIFAPYFPPDDPQRFALVHKVFGASNVSKMLQELPVQQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLA 102
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  AUR62009681-RA 103 MAQAE 107
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MGGTGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPQRFALV HKVFGASNVS KMLQELPVQQ  60
RADAVSSLVY EANARVRDPV YGCVGAISFL QNQVSQLQMQ LAMAQAEILS IQMHQDPTTM  120
LLQNQIEFPD DKSLLLATSN NFSNLQQYLN DFAASTGTGN VIQDPLKRES LWT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-72LBD family protein