PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009555-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 839aa    MW: 96562.4 Da    PI: 5.8885
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009555-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS330.43.4e-10147983613374
            GRAS  13 ssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaNqaIleav 106
                     ++ +l+ a  +L++++e++ p+gd +qR+a+y++++L+arl +      k l+ ++++e+   se+l+a ++++   P+  +s+ t N++I + v
  AUR62009555-RA 479 TQVNLTGAYDMLKQIREHSPPYGDFLQRVAHYLANGLEARLEG------KELKLTHANEEVsPSEVLKANRIYVASVPFQIMSYYTMNKTIARLV 567
                     6789999************************************......44433333333336899***************************** PP

            GRAS 107 egeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                     e++  +Hi+Df+i +GlQWp+++q L++Rp+gpp++RiTg++ p+ g   +e++eetg+ Lak++e+ +vpfe+ + +ak++ed++leeL+++++
  AUR62009555-RA 568 EEAPSIHIVDFGIYYGLQWPCIIQNLSKRPNGPPRIRITGIDFPQRGfrPAERVEETGRCLAKYCEKYNVPFEYYP-IAKKWEDVQLEELKIERN 661
                     *********************************************99*****************************.7***************** PP

            GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                     E l+Vn+ ++ h l+desv+ +s+rd++Lklv++++P+++ ++  ++  + + Fl+rf e + +ysalfd +e+++++e++er  +E +l g+++
  AUR62009555-RA 662 EPLVVNCLYRAHLLFDESVEENSPRDTFLKLVRKINPDIFMHAVVNSTSSVPFFLNRFKEVMFHYSALFDIFESTMSKEDNERLLLESKLYGPQA 756
                     *********************************************************************************************** PP

            GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      nv+aceg er+er e++++W+ r ++aGF++v l+ +    a++++++   ++++ + + +++v+gWk+r L+++S+W+
  AUR62009555-RA 757 LNVIACEGMERVERPESYKQWQVRTQRAGFEQVGLDRELLRRARAMVKRSFREEFSYDVDGNWVVQGWKGRILYAISCWK 836
                     *************************************************99999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MEKREDRVAL RLCEKRMCVM SKNESVDRIS WLPEHVLHVI LDKLDPLKDV GRSSVLSKTW  60
KSHLSLLYAV IEDDDVMNLT HSCPAIETLE FDHCTFWINT LELSVFPRLK KATFLDRYDY  120
LIDTVLDHTG LESFTYKAGA RCVFAAAVYA SIKELTLSYD CTISALNLFV DLTDTFPFLE  180
EADLTLRLQY VDGGDTFKTF RAANHHLSKL SISIPNAVQV EEINISCPNL EWFKFHGCGL  240
KQICINCPSL RQFHYVGNEI PVLPLLNASP TGMEDIYFQL GKIYDFSNLW FIQMRGLIEQ  300
MARVGRVFRL SLDYDVKMQY GPIEAIQQPN VHLEIKFEEL MNPAALVDGL IWSTRPTTIT  360
IYSFHQHDIV KITGPGDLIG GGGESVHFNE AGFGFIINDN NYLLQDQVIG HSVSRVGNLE  420
APICEKGDQS YSDNTRRRKH DNEENGDQRK NKNITPCNDE VIEQIEQYGD VILCPEGRTQ  480
VNLTGAYDML KQIREHSPPY GDFLQRVAHY LANGLEARLE GKELKLTHAN EEVSPSEVLK  540
ANRIYVASVP FQIMSYYTMN KTIARLVEEA PSIHIVDFGI YYGLQWPCII QNLSKRPNGP  600
PRIRITGIDF PQRGFRPAER VEETGRCLAK YCEKYNVPFE YYPIAKKWED VQLEELKIER  660
NEPLVVNCLY RAHLLFDESV EENSPRDTFL KLVRKINPDI FMHAVVNSTS SVPFFLNRFK  720
EVMFHYSALF DIFESTMSKE DNERLLLESK LYGPQALNVI ACEGMERVER PESYKQWQVR  780
TQRAGFEQVG LDRELLRRAR AMVKRSFREE FSYDVDGNWV VQGWKGRILY AISCWKPT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46600.21e-134GRAS family protein