PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009487-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 93aa    MW: 10654.2 Da    PI: 9.8492
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009487-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding70.72.3e-222067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ll+++v+++G g+W+++ar+ g++R++k+c++rw +yl
   AUR62009487-RA 20 KGPWTPEEDKLLIEYVNLHGEGRWSSVARCAGLNRSGKSCRLRWVNYL 67
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MVGSLMAAWP VQQQQQGWRK GPWTPEEDKL LIEYVNLHGE GRWSSVARCA GLNRSGKSCR  60
LRWVNYLRPG LKRGQITPQE EGIIIELHSI WGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.19e-47MYB family protein