PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009210-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 327aa    MW: 36703.1 Da    PI: 7.3954
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009210-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.3e-07112132526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f+r G C+ Gd+C +aHg
  AUR62009210-RA 112 ACPEFRR-GSCRKGDSCEYAHG 132
                     7******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MMMIHRQHPT VDIPQWDPPY EDPTTPIFSP QTNDYFAALK RYLPSSEFDD SDTESSDLPF  60
DSFTFDNFRM YEFKVRKCVR GRSHDWTECP YAHPGEKARR RDPRKYHYSG TACPEFRRGS  120
CRKGDSCEYA HGVFECWLHP ARYRTQPCKD GPHCKRRVCF FAHSPEQLRV LPSLSESPRR  180
LGGGDTCKGF VGYSPTSVFD SFPDSPPLSP SVSELASAMR GLQLGPRNVW GVQMGCSSPR  240
SPRGFMGSGL CGGSSGPTTP NRSGLGLFDP FEVGFEEEVP MERVESGKDL RARMYAKLSK  300
ENSLDCDRVN SVSSGPDFGW VSDLIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.13e-90C3H family protein