PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009126-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 375aa MW: 41944.1 Da PI: 4.5493

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009126-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.9	7.8e-34	48	139	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed+++++++sws+ nsf+v+d+ +f++ +Lpk+Fkh+nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll+k AUR62009126-RA 48 FLIKIFDMVEDPSTDTIVSWSKARNSFIVWDSIKFSTLLLPKFFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKK 133 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ AUR62009126-RA 134 IKRRRN 139 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MENVIVKEEE VTIPCNAGTG SSISSSSSVS SFSARPMEGL HEMGPPPFLI KIFDMVEDPS 60 TDTIVSWSKA RNSFIVWDSI KFSTLLLPKF FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN 120 EGFLGGQKHL LKKIKRRRNV GQNIQHQGGA CVEIGHYGLD GEMERLRRDR NVLMAELVKL 180 RQQQQVSREQ IRTMESRLQS TERKQQQMMT FLAKALTNPA FVQNLMQHNE QGRVFEGIEI 240 GRKRRLTASP SAESLQEEVL SAAVEATEGL ASVESEIQTL FSAALDDESS SDVKEPILEP 300 APIPSSVGAN LGNVNEISWE ELLSEDLLGE GEGYVGDEQE VDVPVEDLVP DPSNWGEDLQ 360 DLIDQMGFLR SKPE*

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MENVIVKEEE VTIPCNAGTG SSISSSSSVS SFSARPMEGL HEMGPPPFLI KIFDMVEDPS  60
TDTIVSWSKA RNSFIVWDSI KFSTLLLPKF FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN  120
EGFLGGQKHL LKKIKRRRNV GQNIQHQGGA CVEIGHYGLD GEMERLRRDR NVLMAELVKL  180
RQQQQVSREQ IRTMESRLQS TERKQQQMMT FLAKALTNPA FVQNLMQHNE QGRVFEGIEI  240
GRKRRLTASP SAESLQEEVL SAAVEATEGL ASVESEIQTL FSAALDDESS SDVKEPILEP  300
APIPSSVGAN LGNVNEISWE ELLSEDLLGE GEGYVGDEQE VDVPVEDLVP DPSNWGEDLQ  360
DLIDQMGFLR SKPE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	137	LKKIKRR
2	165	170	RLRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-120	HSF family protein