PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62008744-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | GATA | ||||||||
Protein Properties | Length: 111aa MW: 11980 Da PI: 9.3408 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58 | 1.3e-18 | 27 | 61 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+tt+TplWR gp g+ktLCnaCG++y k+++ AUR62008744-RA 27 CTDCQTTTTPLWRGGPAGPKTLCNACGIKYHKRRR 61 *******************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MMLDLKEEQP CSVSESQSSS SELLKRCTDC QTTTTPLWRG GPAGPKTLCN ACGIKYHKRR 60 RALLGLDKGK IKVMASGGIR QSAEKLRDKL GEVEQAAMLL MALSYGSVYA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 2e-30 | GATA family protein |