PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62008733-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 380aa MW: 43990.8 Da PI: 6.791 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 85.2 | 6.7e-27 | 206 | 259 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt+eLH++Fvea++q+ Gs k +Pk+ile+m+++gLt+e+v+SHLQkYRl AUR62008733-RA 206 KQRVIWTTELHAKFVEAINQI-GSAKVVPKKILEIMNIPGLTRENVASHLQKYRL 259 79*******************.99******************************8 PP | |||||||
2 | Myb_DNA-binding | 39.9 | 1e-12 | 210 | 258 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WTte++ ++v+a++q G+ +k+I + m+ g+t++++ s++qky+ AUR62008733-RA 210 IWTTELHAKFVEAINQIGSAkvVPKKILEIMNiPGLTRENVASHLQKYR 258 5*****************99****************************7 PP | |||||||
3 | Response_reg | 64.3 | 6e-22 | 7 | 114 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHHHHHHHHHT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeeedalealka 92 vlivd + + + l+++l++ ++ +v+ ++ ++ea+ +l+e + +D +++D++mp+mdG+ellk i +++p+++ + + ++e+++ + l AUR62008733-RA 7 VLIVDYDLNHLLRLEKMLQSNHF-KVTKCQYAKEAISMLQEDRnrFDFVITDLNMPDMDGFELLKCIGLD-MDIPVLMTStTDDDEDLIRKGLIH 99 89***999***************.***************999999**********************764.48*******45555999999**** PP TESEEEESS--HHHH CS Response_reg 93 GakdflsKpfdpeel 107 Ga dfl Kp+++e++ AUR62008733-RA 100 GACDFLIKPIQMENV 114 **********99875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 380 aa Download sequence |
MNREWKVLIV DYDLNHLLRL EKMLQSNHFK VTKCQYAKEA ISMLQEDRNR FDFVITDLNM 60 PDMDGFELLK CIGLDMDIPV LMTSTTDDDE DLIRKGLIHG ACDFLIKPIQ MENVKHLWKY 120 AYWKQRHQRV EQPTRSTSSS SHIDNDLNES NTRENHFEKI NINSSKIDSI VASSDCEDDE 180 KCMKKRKHAT NLGDLLVNDD ATTKKKQRVI WTTELHAKFV EAINQIGSAK VVPKKILEIM 240 NIPGLTRENV ASHLQKYRLY HKKFEQISQH QNEGKTFISP IDVYSVQAQV LPNSSPFQVR 300 DFTSLNSHPR NLRLHHHVEN GGNVIYHPVV SYAYCSTKVP LVENACSLKE TTSIEEQVNN 360 TYESYVHDLC YNNTTFNFD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-70 | ARR-B family protein |